MADS-box family gene
| Contact: | Sanjay Kapoor |
| Organization: | University of Delhi, South Campus |
| Source: | Arora R, Agarwal P, Ray S, Singh AK, Singh VP, Tyagi AK, Kapoor S. (2007) MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress. BMC Genomics. 8:242. |
| Criteria: | The protein has MADS domain as identified by HMM search and confirmed by NCBI-CD tool and SMART database. |
| Gene Name: | OsMADS67 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| Comment: | CM000149 |
| Structural Annotation: | |
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| Gene Name: | OsMADS3 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS3 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK108568 |
| Structural Annotation: | |
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| Gene Name: | OsMADS91 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS91 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS88 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS88 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS89 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS89 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS92 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS92 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS93 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS93 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS94 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS94 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS95 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS95 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS32 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS32 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS2 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS2 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070894 |
| Structural Annotation: | |
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| Gene Name: | OsMADS21 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS21 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070958 |
| Structural Annotation: | |
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| Gene Name: | OsMADS96 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS96 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS97 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS97 - MADS-box family gene with M-beta type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS98 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS98 - MADS-box family gene with M-beta type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS65 |
| Gene Description: | MADS-box family gene with MIKC* type-box |
| MSU Annotation: | OsMADS65 - MADS-box family gene with MIKC* type-box, expressed |
| Comment: | AK066160 |
| Structural Annotation: | |
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| Gene Name: | OsMADS79 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS79 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS60 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS60 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK060830, AK121824 |
| Structural Annotation: | |
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| Gene Name: | OsMADS80 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS80 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS29 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS29 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK109522 |
| Structural Annotation: | |
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| Gene Name: | OsMADS27 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS27 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS6 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS6 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK069103 |
| Structural Annotation: | |
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| Gene Name: | OsMADS57 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS57 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK108784 |
| Structural Annotation: | |
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| Gene Name: | OsMADS22 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS22 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070121 |
| Structural Annotation: | |
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| Gene Name: | OsMADS50 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS50 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK067641, AK104921 |
| Structural Annotation: | |
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| Gene Name: | OsMADS47 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS47 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS1 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS1 - MADS-box family gene with MIKCc type-box, expressed |
| Mutant Line/Info: | lhs1 (leafy hull sterile 1) |
| Comment: | AK070981, AK069728 |
| Structural Annotation: | |
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| Gene Name: | OsMADS72 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS72 - MADS-box family gene with M-alpha type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS86 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS86 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS87 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS87 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS14 |
| Alternate Gene Name: | RAP1B, FDRMADS6 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS14 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK121171 |
| Structural Annotation: | |
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| Gene Name: | OsMADS34 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS34 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK100227 |
| Structural Annotation: | |
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| Gene Name: | OsMADS25 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS25 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK102927 |
| Structural Annotation: | |
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| Gene Name: | OsMADS81 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS81 - MADS-box family gene with M-gamma type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS82 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS82 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS83 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS83 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS84 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS84 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS85 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS85 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS99 |
| Gene Description: | MADS-box family gene with M-gamma type-box |
| MSU Annotation: | OsMADS99 - MADS-box family gene with M-gamma type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS64 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS64 - MADS-box family gene with M-alpha type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS61 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS61 - MADS-box family gene with MIKCc type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS17 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS17 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070540 |
| Structural Annotation: | |
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| Gene Name: | OsMADS31 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS31 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS66 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS66 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS58 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS58 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK111723 |
| Structural Annotation: | |
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| Gene Name: | OsMADS70 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS70 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS4 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS4 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK100233 |
| Structural Annotation: | |
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| Gene Name: | OsMADS5 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS5 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK064184 |
| Structural Annotation: | |
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| Gene Name: | OsMADS55 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS55 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK111859 |
| Structural Annotation: | |
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| Gene Name: | OsMADS63 |
| Gene Description: | MADS-box family gene with MIKC* type-box |
| MSU Annotation: | OsMADS63 - MADS-box family gene with MIKC* type-box, expressed |
| Comment: | AK111776 |
| Structural Annotation: | |
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| Gene Name: | OsMADS71 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS71 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS59 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS59 - MADS-box family gene with MIKCc type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS75 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS75 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS76 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS76 - MADS-box family gene with M-alpha type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS30 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS30 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS16 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS16 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK069317 |
| Structural Annotation: | |
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| Gene Name: | OsMADS15 |
| Alternate Gene Name: | RAP1A |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS15 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK072683 |
| Structural Annotation: | |
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| Gene Name: | OsMADS90 |
| Gene Description: | MADS-box family gene with M-beta type-box |
| MSU Annotation: | OsMADS90 - MADS-box family gene with M-beta type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS18 |
| Alternate Gene Name: | OsMADS28, FDRMADS7 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS18 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK064704 |
| Structural Annotation: | |
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| Gene Name: | OsMADS26 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS26 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK069122 |
| Structural Annotation: | |
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| Gene Name: | OsMADS69 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS69 - MADS-box family gene with M-alpha type-box, expressed |
| Comment: | NM_001068023 |
| Structural Annotation: | |
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| Gene Name: | OsMADS23 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS23 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS62 |
| Gene Description: | MADS-box family gene with MIKC* type-box |
| MSU Annotation: | OsMADS62 - MADS-box family gene with MIKC* type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS7 |
| Alternate Gene Name: | OsMADS45 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS7 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK100263 |
| Structural Annotation: | |
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| Gene Name: | OsMADS37 |
| Gene Description: | MADS-box family gene with MIKC* type-box |
| MSU Annotation: | OsMADS37 - MADS-box family gene with MIKC* type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS77 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS77 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS78 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS78 - MADS-box family gene with M-alpha type-box |
| Structural Annotation: | |
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| Gene Name: | OsMADS8 |
| Alternate Gene Name: | OsMADS24 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS8 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK072867 |
| Structural Annotation: | |
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| Gene Name: | OsMADS56 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS56 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070135 |
| Structural Annotation: | |
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| Gene Name: | OsMADS68 |
| Gene Description: | MADS-box family gene with MIKC* type-box |
| MSU Annotation: | OsMADS68 - MADS-box family gene with MIKC* type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS33 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS33 - MADS-box family gene with MIKCc type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS13 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS13 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AK070425 |
| Structural Annotation: | |
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| Gene Name: | OsMADS73 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS73 - MADS-box family gene with M-alpha type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS74 |
| Gene Description: | MADS-box family gene with M-alpha type-box |
| MSU Annotation: | OsMADS74 - MADS-box family gene with M-alpha type-box, expressed |
| Structural Annotation: | |
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| Gene Name: | OsMADS20 |
| Gene Description: | MADS-box family gene with MIKCc type-box |
| MSU Annotation: | OsMADS20 - MADS-box family gene with MIKCc type-box, expressed |
| Comment: | AAO92341, AY250075 |
| Structural Annotation: | |
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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.