BTB proteins with Non-Phototrophic Hypocotyl 3 (NPH3) domain (subfamily F)

   
Superfamily: Bric-A-Brac/Tramtrack/Broad Complex (BTB) Proteins
Contact: Derek Gingerich
Organization: University of Wisconsin-Eau Claire
Source: Gingerich DJ, Hanada K, Shiu SH, Vierstra RD (2007) Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice. Plant Cell 19(8):2329-48
Criteria: Annotation is based on the comparison of homologous genes in rice and Arabidopsis and, when available, on full-length cDNAs
   

LOC_Os01g57230
Gene Name: BTBN1
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008207
Comment: AK120823
Structural Annotation:  

   

LOC_Os02g35970
Gene Name: BTBN2
Alternate Gene Name: CPT1
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008208
Structural Annotation:  

   

LOC_Os02g38120
Gene Name: BTBN3
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008208
Structural Annotation:  

   

LOC_Os03g10800
Gene Name: BTBN4
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008209
Comment: AK103674
Structural Annotation:  

   

LOC_Os03g10880
Gene Name: BTBN5
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008209
Comment: BM420577 BM420733 CB659303 CB643065
Structural Annotation:  

   

LOC_Os03g22600
Gene Name: BTBN6
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008209
Comment: AK110492
Structural Annotation:  

   

LOC_Os03g41350
Gene Name: BTBN7
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008209
Comment: AK065981
Structural Annotation:  

   

LOC_Os03g43990
Gene Name: BTBN8
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008209
Comment: CI607810 CI751411 CI624881
Structural Annotation:  

   

LOC_Os03g52880
Gene Name: BTBN9
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008209
Comment: CI057298 CI033851 CB640028 CI286283
Structural Annotation:  

   

LOC_Os03g55830
Gene Name: BTBN10
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008209
Comment: AK111226
Structural Annotation:  

   

LOC_Os04g40100
Gene Name: BTBN11
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008210
Comment: AK067981
Structural Annotation:  

   

LOC_Os04g54400
Gene Name: BTBN12
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008210
Comment: AK109716
Structural Annotation:  

   

LOC_Os04g57800
Gene Name: BTBN13
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008210
Comment: AK059048 AK119773
Structural Annotation:  

   

LOC_Os05g11190
Gene Name: BTB2
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain
MSU Annotation: BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain
GenBank Genomic Acc: AP008211
Structural Annotation:  

   

LOC_Os06g08550
Gene Name: BTBN14
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008212
Structural Annotation:  

   

LOC_Os07g36230
Gene Name: BTBN15
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008213
Structural Annotation:  

   

LOC_Os07g39530
Gene Name: BTBN16
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008213
Comment: AK102803
Structural Annotation:  

   

LOC_Os08g03650
Gene Name: BTBN17
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008214
Comment: AK100956
Structural Annotation:  

   

LOC_Os09g09370
Gene Name: BTBN18
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008215
Comment: AK110823 CX110239
Structural Annotation:  

   

LOC_Os09g25330
Gene Name: BTBN19
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008215
Comment: AK065475
Structural Annotation:  

   

LOC_Os11g02610
Gene Name: BTBN20
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008217
Comment: AK119514 AK064985 AK060741
Structural Annotation:  

   

LOC_Os11g02620
Gene Name: BTBN21
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008217
Comment: AK066267
Structural Annotation:  

   

LOC_Os12g02530
Gene Name: BTBN22
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008218
Comment: AK119514 AK064985 AK060741
Structural Annotation:  

   

LOC_Os12g02540
Gene Name: BTBN23
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008218
Comment: AK066267
Structural Annotation:  

   

LOC_Os12g39380
Gene Name: BTBN24
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
MSU Annotation: BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
GenBank Genomic Acc: AP008218
Comment: AK071898
Structural Annotation:  

   

LOC_Os12g41910
Gene Name: BTBN25
Gene Description: Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
MSU Annotation: BTBN25 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
GenBank Genomic Acc: AP008218
Structural Annotation:  

 

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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.