Prolyl Oligopeptidase family (Peptidase_S9; PF00326)

   
Contact: R. Sowdhamini
Organization: National Centre for Biological Sciences, Bangalore, India
Source: Tripathi LP, Sowdhamini R (2006) Cross genome comparisons of serine proteases in Arabidopsis and rice. BMC Genomics. 9;7:200
Criteria: Contains a SP9 domain
   

LOC_Os01g01830
Gene Name: OsPOP1
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: S9N, SP9
Putative member of S9A subfamily (MEROPS3)
Structural Annotation:  

   

LOC_Os01g42690
Gene Name: OsPOP2
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os01g49510
Gene Name: OsPOP3
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: M
Structural Annotation:  

   

LOC_Os01g57770
Gene Name: OsPOP4
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP4 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os02g18850
Gene Name: OsPOP5
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: DPN, SP9
Structural Annotation:  

   

LOC_Os02g55330
Gene Name: OsPOP6
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os03g19410
Gene Name: OsPOP7
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: M
Putative member of S9D subfamily (MEROPS3)
Structural Annotation:  

   

LOC_Os03g24450
Gene Name: OsPOP8
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP8 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os04g47360
Gene Name: OsPOP9
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP9 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os05g46210
Gene Name: OsPOP10
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os06g06770
Gene Name: OsPOP11
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Serine Protease Homologue: one or more catalytic residues are either mutated or missing4
Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os06g11180
Gene Name: OsPOP12
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os06g11190
Gene Name: OsPOP13
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os06g42730
Gene Name: OsPOP14
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os06g51410
Gene Name: OsPOP15
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: S9N, SP9
Predicted localization2: M
Structural Annotation:  

   

LOC_Os07g41730
Gene Name: OsPOP16
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: S
Structural Annotation:  

   

LOC_Os07g48970
Gene Name: OsPOP17
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP17 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Serine Protease Homologue: one or more catalytic residues are either mutated or missing4
Putative member of S9D subfamily (MEROPS3)
Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os09g28040
Gene Name: OsPOP18
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP18 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Serine Protease Homologue: one or more catalytic residues are either mutated or missing4
Contains the following domain(s)1: S9N, SP9
Predicted localization2: M
Structural Annotation:  

   

LOC_Os09g29950
Gene Name: OsPOP19
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os10g04620
Gene Name: OsPOP20
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os10g28020
Gene Name: OsPOP21
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: PD40, SP9
Predicted localization2: C
Structural Annotation:  

   

LOC_Os10g28030
Gene Name: OsPOP22
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

   

LOC_Os12g18860
Gene Name: OsPOP23
Gene Description: Putative Prolyl Oligopeptidase homologue in rice
MSU Annotation: OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed
Comment: Contains the following domain(s)1: SP9
Structural Annotation:  

 
References:
1SPxx- Serine protease family SPxx domain, where SPxx refers to the serine protease family as per MEROPS classification; PDZ� PDZ domain (Pfam accession: PF00595; PA� Protease associated domain (Pfam accession: PF02225); SN- Subtilisin N-terminal region (Pfam accession: PF005922); D1034- Domain of unknown function (Pfam accession: PF06280); Arf- ADP-ribosylation factor family (Pfam accession: PF00025); C2- C2 domain (Pfam accession: PF00168); zf- Zinc knuckle (Pfam accession: PF00098); rve� Integrase core domain (Pfam accession:PF00665); EX2- Extensin-like region (Pfam accession: PF04554); S9N- Prolyl oligopeptidase, N-terminal beta-propeller domain (Pfam accession: PF02897); PD40- WD40-like beta propeller repeat (Pfam accession: PF07676); DPN- Dipeptidyl peptidase (DPP IV) N-terminal region (Pfam accession: PF00930); Transposase_21- Transposase family tnp2 (Pfam accession: PF02992); Retrotrans- Retrotransposon gag protein (Pfam accession: PF03732); ABC1- ABC1 family (Pfam accession: PF03109); LON- ATP-dependent protease La (LON) domain (Pfam accession: PF02190); AAA- ATPase family associated with various cellular activities (Pfam accession: PF00004); UBA- UBA/TN-S domain (Pfam accession: PF000627)
2 C: chloroplast ; M: mitochondrion S: secreted. Predictions were made using TargetP (Emanuelsson et al., 2000)
3 MEROPS- An information resource for peptidases and their inhibitors (Rawlings et al., 2006)
4 Pils and Schultz (2004); Ross et al. (2003)

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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.