Rice calmodulin-related calcium sensor proteins
| Contact: | Teerapong Buaboocha |
| Organization: | Chulalongkorn University, Bangkok, Thailand |
| Source: | Bongkoj Boonburapong, Teerapong Buaboocha (2007) Genome-wide identification and analyses of the rice calmodulin and related potential calcium sensor proteins. BMC Plant Biology, 7:4 |
| Criteria: | The Oryza sativa L. genome was searched against the Interpro database by five different methods including HMMPfam, HMMSmart, BlastProDom, ProfileScan and superfamily to find proteins that contain calcium-binding EF-hand motifs. Calmodulin-related proteins were identified based on amino acid sequence identity with rice CaM1 and CBL3 and phylogenetic analysis based on amino acid sequence alignments by ClustalX. |
| Gene Name: | OsCML16 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML16 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP003214 |
| Comment: | AK062711 |
| Structural Annotation: | |
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| Gene Name: | OsCML11 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML11 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP003054� |
| Comment: | AK072726 |
| Structural Annotation: | |
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| Gene Name: | OsCML12 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML12 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP003022 |
| Comment: | AK064844 |
| Structural Annotation: | |
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| Gene Name: | OsCML1 |
| Alternate Gene Name: | OsCam61 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML1 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP003260 |
| Mutant Line/Info: | AG207931 |
| Comment: | AF231026 |
| Structural Annotation: | |
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| Gene Name: | OsCML10 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML10 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP003735 |
| Comment: | AK070662 |
| Structural Annotation: | |
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| Gene Name: | OsCML31 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML31 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP004368 |
| Comment: | AK062671 |
| Structural Annotation: | |
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| Gene Name: | OsCML23 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML23 - Calmodulin-related calcium sensor protein |
| Structural Annotation: | |
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| Gene Name: | OsCML19 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML19 - Calmodulin-related calcium sensor protein |
| Structural Annotation: | |
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| Gene Name: | OsCML17 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML17 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP006438 |
| Comment: | AK100200 |
| Structural Annotation: | |
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| Gene Name: | OsCML20 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML20 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP005319 |
| Comment: | AK108506 |
| Structural Annotation: | |
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| Gene Name: | OsCML27 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML27 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AF325719 |
| Comment: | AK109470 |
| Structural Annotation: | |
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| Gene Name: | OsCML4 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML4 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC092558 |
| Comment: | AK067697 |
| Structural Annotation: | |
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| Gene Name: | OsCML22 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML22 - Calmodulin-related calcium sensor protein, expressed |
| Comment: | AK242428 , CI291642 |
| Structural Annotation: | |
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| Gene Name: | OsCML18 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML18 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC120985 |
| Comment: | AK071661 |
| Structural Annotation: | |
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| Gene Name: | OsCML21 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML21 - Calmodulin-related calcium sensor protein, expressed |
| Comment: | AK243353 |
| Structural Annotation: | |
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| Gene Name: | OsCML15 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML15 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC136222 |
| Comment: | AK067214 |
| Structural Annotation: | |
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| Gene Name: | OsCML9 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML9 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC129718� |
| Comment: | AK105230 |
| Structural Annotation: | |
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| Gene Name: | OsCML14 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML14 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC098571 |
| Comment: | AK119799 |
| Structural Annotation: | |
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| Gene Name: | OsCML30 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML30 - Calmodulin-related calcium sensor protein, expressed |
| Comment: | AK105920 |
| Structural Annotation: | |
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| Gene Name: | OsCML29 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML29 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP008207 |
| Comment: | AK070430 |
| Structural Annotation: | |
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| Gene Name: | OsCML13 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML13 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP004309 |
| Comment: | AK074019 |
| Structural Annotation: | |
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| Gene Name: | OsCML24 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML24 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP005099 |
| Comment: | AK062850 |
| Structural Annotation: | |
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| Gene Name: | OsCML7 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML7 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP004562� |
| Comment: | AK059891 |
| Structural Annotation: | |
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| Gene Name: | OsCML32 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML32 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP005506 |
| Comment: | AK071435 |
| Structural Annotation: | |
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| Gene Name: | OsCML8 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML8 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AC078839 |
| Comment: | AK065782 |
| Structural Annotation: | |
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| Gene Name: | OsCML25 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML25 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: | AP008217 |
| Structural Annotation: | |
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| Gene Name: | OsCML2 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML2 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: | AP008217 |
| Structural Annotation: | |
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| Gene Name: | OsCML6 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML6 - Calmodulin-related calcium sensor protein |
| Structural Annotation: | |
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| Gene Name: | OsCML26 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML26 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: | AP008218 |
| Comment: | CI648777 |
| Structural Annotation: | |
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| Gene Name: | OsCML3 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML3 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP008218 |
| Comment: | AK111834 |
| Structural Annotation: | |
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| Gene Name: | OsCML28 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML28 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AP008218 |
| Comment: | AK064732 |
| Structural Annotation: | |
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| Gene Name: | OsCML5 |
| Gene Description: | Calmodulin-related calcium sensor protein |
| MSU Annotation: | OsCML5 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: | AL928781 |
| Comment: | AB060552 |
| Structural Annotation: | |
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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.