Protease inhibitor/Seed Storage/LTP family protein precursor

   
Superfamily: Cysteine Rich Peptides
Contact: Kevin Silverstein
Organization: University of Minnesota
Source: Silverstein, K.A.T., Moskal, W.A., Jr., Wu, H., Underwood, B.A., Graham, M.A., Town, C.D, and VandenBosch, K.A. (2007) Small cysteine peptides resembling antimicrobial peptides have been under-predicted in plants Plant J. 51(2):262-80
Criteria: Iterative HMM family-based searches, starting with known cysteine-rich antimicrobial sequences.
   

Chr10:10502751..10499697

Gene Name: LTPL135
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: The Community Annotated gene is in a large cluster of similar paralogs and may ancestrally have been two genes for which the final exon of the first and the initial exon of the second both died, giving rise to this gene.
Structural Annotation:  

   

Chr11:19388670..19388265

Gene Name: LTPL171
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. This Community Annotation is similar to 5 paralogs.
Structural Annotation:  

   

Chr11:19391457..19391289

Gene Name: LTPL172
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. The LTP family pseudogene fragment is similar to 6 paralogs, one of them adjacent to this gene.
Structural Annotation:  

   

Chr11:19641739..19640975

Gene Name: LTPL49
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: High confidence LTP family gene has 3 close paralogs.
Structural Annotation:  

   

Chr12:7975789..7976163

Gene Name: LTPL34
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. Highly similar to 2 paralogous genes with same one-exon gene structure.
Structural Annotation:  

   

Chr3:25479720..25479358

Gene Name: LTPL92
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. High-confidence LTP with an internal stop-codon is in a large cluster with other similar genes.
Structural Annotation:  

   

Chr5:16450608..16451023

Gene Name: LTPL19
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. High-confidence pseudogene with near-identical intact paralog on chromosome 1.
Structural Annotation:  

   

Chr7:22197218..22196484

Gene Name: LTPL96
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: The first exon of the Community Anntoated gene is of low confidence based on aligned paralogs, but the remaining two exons have highly similar sequences when compared with the paralogs.
Structural Annotation:  

   

Chr7:6681771..6681577

Gene Name: LTPL167
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. The Community Annotation structure has a nearly identical intact paralog nearby.
Structural Annotation:  

   

Chr7:6686287..6686093

Gene Name: LTPL168
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. The Community Annotation structure has a nearly identical intact paralog nearby.
Structural Annotation:  

   

LOC_Os01g12020

Gene Name: LTPL18
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g24590

Gene Name: LTPL46
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL46 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotated gene structure appears truncated relative to close paralog.
Structural Annotation:  

   

LOC_Os01g42210

Gene Name: LTPL47
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL47 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os01g49640

Gene Name: LTPL149
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL149 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g49650

Gene Name: LTPL150
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g58650

Gene Name: LTPL35
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL35 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os01g58660

Gene Name: LTPL29
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g59870

Gene Name: LTPL65
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g60740

Gene Name: LTPL16
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g62980

Gene Name: LTPL101
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g68580

Gene Name: LTPL38
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os01g68589

Gene Name: LTPL39
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL39 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os02g08010

Gene Name: LTPL43
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL43 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Comment: The Community Annotated gene is in a region of the annotated expressed gene that lacks expression evidence.
Structural Annotation:  

   

LOC_Os02g18490

Gene Name: LTPL53
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL53 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotated single exon structure has an extremely similar paralog on Chr 7.
Structural Annotation:  

   

LOC_Os02g24720

Gene Name: LTPL21
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL21 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotation structure is based on two nearly identical paralogous LTP genes on chromosomes 11 and 12.
Structural Annotation:  

   

LOC_Os02g44310

Gene Name: LTPL112
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os02g44320

Gene Name: LTPL113
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os02g49280

Gene Name: LTPL50
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL50 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os03g01300

Gene Name: LTPL115
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g01300

Gene Name: LTPL114
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g01320

Gene Name: LTPL116
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g02050

Gene Name: LTPL151
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g07100

Gene Name: LTPL82
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g09230

Gene Name: LTPL69
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g14615

Gene Name: LTPL117
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL117 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated single-exon gene encodes an LTP similar to the neighboring duplicate. This LTP has a long proline-rich peptided domain sandwiched between the N-terminal signal peptide and the C-terminal mature CRP peptide which is typical of many classes of CRPs.
Structural Annotation:  

   

LOC_Os03g14630

Gene Name: LTPL106
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL106 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g14642

Gene Name: LTPL107
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL107 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated single-exon gene encodes an LTP in a large cluster of other like genes that is fully supported by the TIGR Rice Transcript Assembly TA14723_4530 and EST evidence.
Structural Annotation:  

   

LOC_Os03g14654

Gene Name: LTPL108
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL108 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated single-exon gene encodes an LTP in a large cluster of other like genes that is fully supported by the TIGR Rice Transcript Assembly TA307_4530, FL-cDNA and EST evidence.
Structural Annotation:  

   

LOC_Os03g20760

Gene Name: LTPL66
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL66 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g24300

Gene Name: LTPL1
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g25350

Gene Name: LTPL36
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g26800

Gene Name: LTPL51
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL51 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g26820

Gene Name: LTPL52
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL52 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g43050

Gene Name: LTPL90
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os03g44000

Gene Name: LTPL15
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL15 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g44950

Gene Name: LTPL91
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL91 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated gene excludes the extra exon 5' of start-ATG
Structural Annotation:  

   

LOC_Os03g45150

Gene Name: LTPL93
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL93 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated gene includes the entire signal peptide (first 32 amino acids)
Structural Annotation:  

   

LOC_Os03g46110

Gene Name: LTPL94
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g46150

Gene Name: LTPL72
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g46180

Gene Name: LTPL71
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g47370

Gene Name: LTPL95
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL95 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Comment: Pseudogene. High-confidence LTP pseudogene (internal stop-codon and frame shift) in a large cluster with other similar genes.
Structural Annotation:  

   

LOC_Os03g50960

Gene Name: LTPL118
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g57970

Gene Name: LTPL73
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g57980

Gene Name: LTPL99
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g57990

Gene Name: LTPL74
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os03g58670

Gene Name: LTPL119
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL119 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotated gene is based on alignment with close homologs
Structural Annotation:  

   

LOC_Os03g58940

Gene Name: LTPL83
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os03g59380

Gene Name: LTPL28
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL28 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g09520

Gene Name: LTPL59
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL59 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os04g33920

Gene Name: LTPL102
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g33930

Gene Name: LTPL103
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL103 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g38840

Gene Name: LTPL81
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g46810

Gene Name: LTPL120
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL120 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g46820

Gene Name: LTPL121
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os04g46830

Gene Name: LTPL122
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g52250

Gene Name: LTPL123
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL123 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g52260

Gene Name: LTPL124
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL124 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os04g55159

Gene Name: LTPL125
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
MSU Annotation: LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Comment: Pseudogene. This Community Annotated structure is fully supported by five FL-cDNAs and TIGR Rice Transcript Assembly TA5201_4530 and matches the 33 paralogs within CRP4820 LTP family gene HMM with very high sigificance.
Structural Annotation:  

   

LOC_Os04g55170

Gene Name: LTPL126
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. This Community Annotated structure is based on alignment with close homologs
Structural Annotation:  

   

LOC_Os05g06780

Gene Name: LTPL104
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL104 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os05g40010

Gene Name: LTPL17
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL17 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os05g41030

Gene Name: LTPL67
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os05g47700

Gene Name: LTPL152
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os05g47730

Gene Name: LTPL153
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g01580

Gene Name: LTPL127
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated structure is consistent with gene structure of 31 paralogs, and preserves the crucial last cysteine that the annotation omits.
Structural Annotation:  

   

LOC_Os06g06340

Gene Name: LTPL20
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL20 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os06g07220

Gene Name: LTPL128
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g12440

Gene Name: LTPL60
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL60 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os06g23360

Gene Name: LTPL70
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL70 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g34840

Gene Name: LTPL5
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os06g43600

Gene Name: LTPL129
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g46780

Gene Name: LTPL61
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os06g46870

Gene Name: LTPL62
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os06g47200

Gene Name: LTPL85
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g49190

Gene Name: LTPL154
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os06g49770

Gene Name: LTPL86
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL86 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g07790

Gene Name: LTPL75
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL75 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g07860

Gene Name: LTPL76
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g07870

Gene Name: LTPL77
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os07g07920

Gene Name: LTPL100
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g07930

Gene Name: LTPL78
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g09970

Gene Name: LTPL84
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g11310

Gene Name: LTPL166
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL166 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g11630

Gene Name: LTPL163
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL163 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g11650

Gene Name: LTPL164
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL164 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g12080

Gene Name: LTPL169
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g12090

Gene Name: LTPL165
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL165 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotation structure preserves the crucial first two cysteines that the annotation omits, and is consistent with the transcript evidence.
Structural Annotation:  

   

LOC_Os07g14140

Gene Name: LTPL54
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os07g18750

Gene Name: LTPL42
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g18990

Gene Name: LTPL40
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g19000

Gene Name: LTPL41
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL41 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g27940

Gene Name: LTPL27
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL27 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os07g29230

Gene Name: LTPL63
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os07g30590

Gene Name: LTPL55
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL55 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os07g37385

Gene Name: LTPL109
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL109 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated single-exon gene encodes an LTP with high similarity to 5 paralogs. Notably, this gene encodes an intact proline-rich peptide fused to a CRP with N-term and C-term signal peptides, while simultaneously encoding an intact glycine-rich peptide also encompased by signal peptides on the opposite strand. This structure was also observed in Arabidopsis.
Structural Annotation:  

   

LOC_Os07g39640

Gene Name: LTPL64
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated gene has a different frame and encodes an LTP family protein with the classic intron near the 3' end of the gene is highly similar to 5 paralogs.
Structural Annotation:  

   

LOC_Os07g43290

Gene Name: LTPL56
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os07g46210

Gene Name: LTPL2
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os08g03690

Gene Name: LTPL24
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL24 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os08g15620

Gene Name: LTPL170
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL170 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotation is based on homology to 4 paralogs.
Structural Annotation:  

   

LOC_Os08g27210

Gene Name: LTPL3
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL3 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os08g27674

Gene Name: LTPL130
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL130 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: The Community Annotated gene prediction is similar to 34 paralogous genes
Structural Annotation:  

   

LOC_Os08g35665

Gene Name: LTPL48
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL48 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated gene was predicted by GlimmerHMM and its structure is consistent with two paralogous genes.
Structural Annotation:  

   

LOC_Os08g38100

Gene Name: LTPL131
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL131 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: Pseudogene. The Community Annotated structure is highly similar to 38 paralogous genes
Structural Annotation:  

   

LOC_Os08g42040

Gene Name: LTPL80
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os08g43240

Gene Name: LTPL97
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL97 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os08g43290

Gene Name: LTPL44
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os09g13930

Gene Name: LTPL4
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os09g35700

Gene Name: LTPL45
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g05720

Gene Name: LTPL37
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g09920

Gene Name: LTPL132
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL132 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os10g11370

Gene Name: LTPL87
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL87 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os10g11730

Gene Name: LTPL88
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL88 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g11750

Gene Name: LTPL89
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL89 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g20830

Gene Name: LTPL133
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL133 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g20840

Gene Name: LTPL134
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL134 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os10g20880

Gene Name: LTPL136
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL136 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os10g20890

Gene Name: LTPL137
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL137 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g36070

Gene Name: LTPL155
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL155 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os10g36090

Gene Name: LTPL156
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL156 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os10g36100

Gene Name: LTPL157
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL157 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g36110

Gene Name: LTPL158
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL158 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g36160

Gene Name: LTPL159
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL159 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g36170

Gene Name: LTPL160
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40420

Gene Name: LTPL138
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40430

Gene Name: LTPL139
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL139 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40440

Gene Name: LTPL140
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL140 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40460

Gene Name: LTPL141
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL141 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40470

Gene Name: LTPL142
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL142 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os10g40480

Gene Name: LTPL143
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL143 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40510

Gene Name: LTPL144
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40520

Gene Name: LTPL145
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL145 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40530

Gene Name: LTPL146
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL146 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g40614

Gene Name: LTPL147
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g02165

Gene Name: LTPL57
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL57 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated gene is highly similar to a dozen homologs in other grasses and is fully supported in structure and orientation by TIGR Rice Transcript Assembly CX112109.
Structural Annotation:  

   

LOC_Os11g02330

Gene Name: LTPL22
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL22 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: Community Annotated gene is translated in a different frame. High-confidence gene correction is completely consistent with the FL-cDNA AK063683 and numerous TIGR Rice Transcript Assemblies including TA3509_4530, plus it is highly similar to two other paralogous LTP genes.
Structural Annotation:  

   

LOC_Os11g02350

Gene Name: LTPL25
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL25 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g02369

Gene Name: LTPL7
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g02379

Gene Name: LTPL6
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL6 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g02400

Gene Name: LTPL8
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL8 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g02424

Gene Name: LTPL9
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g03870

Gene Name: LTPL31
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL31 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated gene is translated in a different frame and is consistent with more than a dozen grass paralogous genes.
Structural Annotation:  

   

LOC_Os11g14880

Gene Name: LTPL32
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL32 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated gene includes an additional 99 bp that is 5' to the gene (encoding the signal peptide and part of the mature peptide).
Structural Annotation:  

   

LOC_Os11g24070

Gene Name: LTPL10
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g29420

Gene Name: LTPL30
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL30 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os11g34660

Gene Name: LTPL98
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL98 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g37280

Gene Name: LTPL68
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL68 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os11g37320

Gene Name: LTPL79
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL79 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

   

LOC_Os11g40520

Gene Name: LTPL161
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL161 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. This Community Annotated gene is translated in a different frame and is of very high confidence due to alignment with 13 close paralogous genes (one of them adjacent).
Structural Annotation:  

   

LOC_Os11g40530

Gene Name: LTPL162
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL162 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g02105

Gene Name: LTPL58
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Community Annotated gene is fully supported in orientation and structure by TIGR Rice Transcript Assembly CX112109, and is highly similar to homologs among numerous grasses.
Structural Annotation:  

   

LOC_Os12g02290

Gene Name: LTPL23
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Comment: The Communtiy Annotated gene includes an additional 39 bp (13 aa) which includes the signal peptide and is virtually identical to a paralog on chromosome 11.
Structural Annotation:  

   

LOC_Os12g02300

Gene Name: LTPL26
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g02310

Gene Name: LTPL11
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g02320

Gene Name: LTPL12
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL12 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g02330

Gene Name: LTPL13
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g02340

Gene Name: LTPL14
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, expressed
MSU Annotation: LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
Structural Annotation:  

   

LOC_Os12g13960

Gene Name: LTPL33
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: The Community Annotated gene has a single exon. This structure is consistent with the transcriptional evidence, and preserves the final crucial cysteines.
Structural Annotation:  

   

LOC_Os12g28880

Gene Name: LTPL110
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL110 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
Structural Annotation:  

   

LOC_Os12g29040

Gene Name: LTPL111
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor
MSU Annotation: LTPL111 - Protease inhibitor/seed storage/LTP family protein precursor
Comment: Pseudogene. The Community Annotated single exon gene is consistent with gene structure of neighboring paralog and other single-exon genes of its class.
Structural Annotation:  

   

LOC_Os12g29160

Gene Name: LTPL105
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL105 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Comment: This LTP variant is in a cluster with 2 similar paralogs and has the characteristics signal peptide / PRP/ LTP configuration of the CRP4800 and CRP4810 class. This Community Annotated gene was predicted by GlimmerHMM.
Structural Annotation:  

   

LOC_Os12g32960

Gene Name: LTPL148
Gene Description: Protease inhibitor/seed storage/LTP family protein precursor, putative
MSU Annotation: LTPL148 - Protease inhibitor/seed storage/LTP family protein precursor, putative
Structural Annotation:  

 

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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.