Bowman-Birk type brain trypsin inhibitor
Superfamily:
Cysteine Rich Peptides
Contact:
Kevin Silverstein
Organization:
University of Minnesota
Source:
Silverstein, K.A.T., Moskal, W.A., Jr., Wu, H., Underwood, B.A., Graham, M.A., Town, C.D, and VandenBosch, K.A. (2007) Small cysteine peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J. 51 (2):262-80
Criteria:
Iterative HMM family-based searches, starting with known cysteine-rich antimicrobial sequences.
Chr2:24864049..24864333
Gene Name:
BBTI9
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, putative
Comment:
Pseudogene.
Structural Annotation:
LOC_Os01g03310
Gene Name:
BBTI1
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI1 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03320
Gene Name:
BBTI2
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI2 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03330
Gene Name:
BBTI3
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI3 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03340
Gene Name:
BBTI4
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI4 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03360
Gene Name:
BBTI5
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI5 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03380
Gene Name:
BBTI6
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, putative
MSU Annotation:
BBTI6 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed
Structural Annotation:
LOC_Os01g03390
Gene Name:
BBTI7
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI7 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g03680
Gene Name:
BBTI8
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI8 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os01g04040
Gene Name:
BBTI11
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, putative
MSU Annotation:
BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative
Structural Annotation:
LOC_Os01g04050
Gene Name:
BBTI12
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os03g60840
Gene Name:
BBTI13
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor, expressed
MSU Annotation:
BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
Structural Annotation:
LOC_Os07g27980
Gene Name:
BBTI10
Gene Description:
Bowman-Birk type bran trypsin inhibitor precursor
MSU Annotation:
BBTI10 - Bowman-Birk type bran trypsin inhibitor precursor
Comment:
Two exon pseudogene and gene structure is consistent with 8 paralogs. This two exon structure preserves the several crucial cysteines.
Structural Annotation:
This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.