F-box and TUB Domain Containing Proteins

   
Superfamily: F-box proteins
Contact: Jitendra Khurana
Organization: University of Delhi
Website: http://genomeindia.org/DPMB/index.htm
Source: Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiology 143(4):1467-83
Criteria: BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name.
   

LOC_Os01g48370

Gene Name: OsFBT1
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT1 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP003264
Structural Annotation:  

   

LOC_Os01g55430

Gene Name: OsFBT2
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT2 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP003409
Structural Annotation:  

   

LOC_Os01g64700

Gene Name: OsFBT3
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT3 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP003270
Structural Annotation:  

   

LOC_Os02g47640

Gene Name: OsFBT4
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT4 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP005323
Structural Annotation:  

   

LOC_Os03g22800

Gene Name: OsFBT5
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT5 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AC135257
Structural Annotation:  

   

LOC_Os04g59130

Gene Name: OsFBT6
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT6 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AL606637
Structural Annotation:  

   

LOC_Os05g36190

Gene Name: OsFBT7
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT7 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AC105318
Structural Annotation:  

   

LOC_Os05g40520

Gene Name: OsFBT8
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT8 - F-box and tubby domain containing protein
GenBank Genomic Acc: AC118289
Structural Annotation:  

   

LOC_Os05g43850

Gene Name: OsFBT9
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT9 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AC132485
Structural Annotation:  

   

LOC_Os05g48670

Gene Name: OsFBT10
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT10 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AC113333
Structural Annotation:  

   

LOC_Os07g47110

Gene Name: OsFBT11
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT11 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP004274
Structural Annotation:  

   

LOC_Os08g01290

Gene Name: OsFBT12
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT12 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AP004654
Structural Annotation:  

   

LOC_Os11g06420

Gene Name: OsFBT13
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT13 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AC120533
Structural Annotation:  

   

LOC_Os12g06630

Gene Name: OsFBT14
Gene Description: F-box and tubby domain containing protein
MSU Annotation: OsFBT14 - F-box and tubby domain containing protein, expressed
GenBank Genomic Acc: AL713906
Structural Annotation:  

 

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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.