F-box and Fibrin-Binding Domain Containing Proteins
| Superfamily: | F-box proteins |
| Contact: | Jitendra Khurana |
| Organization: | University of Delhi |
| Website: | http://genomeindia.org/DPMB/index.htm |
| Source: | Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: | BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
| Gene Name: | OsFBD1 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD1 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP002908 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD2 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD2 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: | AP003253 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD3 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD3 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003253 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD4 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD4 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003253 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD5 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD5 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003253 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD6 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD6 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP004838 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD7 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD7 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: | AP004156 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD8 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD8 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP004118, AP004786 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD9 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD9 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AL606994 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD10 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD10 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AL606994 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD11 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD11 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003577 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD12 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD12 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003521 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD13 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD13 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP003810 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD14 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD14 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AP005405 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD15 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD15 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AL831808 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD16 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD16 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: | AL928745 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBD17 |
| Gene Description: | F-box and FBD domain containing protein |
| MSU Annotation: | OsFBD17 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: | AL928745 |
| Structural Annotation: | |
|
| |
|
|
|
This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.