F-Box and Other Domains Containing Proteins
| Superfamily: | F-box proteins |
| Contact: | Jitendra Khurana |
| Organization: | University of Delhi |
| Website: | http://genomeindia.org/DPMB/index.htm |
| Source: | Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: | BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
| Gene Name: | OsFBO1 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO1 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP002522 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO2 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO2 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP006843 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO7 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO7 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP003683 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO8 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO8 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP005412 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO11 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO11 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP005317 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO12 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO12 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP006168 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO13 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO13 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC135157 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO14 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO14 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC092075 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO16 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO16 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC097368 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO3 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO3 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AL731619 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO17 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO17 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AL731582 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO18 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO18 - F-box and other domain containing protein |
| GenBank Genomic Acc: | AP001389 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO9 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO9 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP003770 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO19 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO19 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP003960 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO20 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO20 - F-box and other domain containing protein |
| GenBank Genomic Acc: | AP005819 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO21 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO21 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP005308 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO22 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO22 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AP006170 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO5 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO5 - F-box and other domain containing protein |
| GenBank Genomic Acc: | AC074283, AC099733 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO4 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO4 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC148759 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO10 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO10 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC134053 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO15 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO15 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC108871 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO6 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO6 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: | AC109929 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO23 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO23 - F-box and other domain containing protein |
| GenBank Genomic Acc: | BX000504 |
| Structural Annotation: | |
|
| |
| Gene Name: | OsFBO24 |
| Gene Description: | F-box and other domain containing protein |
| MSU Annotation: | OsFBO24 - F-box and other domain containing protein |
| GenBank Genomic Acc: | AL929350 |
| Structural Annotation: | |
|
| |
|
|
|
This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.