| |
|
| Contact: |
James Ketudat Cairns |
| Organization: |
Suranaree University of Technology, Nakhon Ratachasima, Thailand |
| Source: |
Opassiri R, Pomthong B, Onkoksoong T, Akiyama T, Esen A, Ketudat Cairns JR (2006) Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase. BMC Plant Biology 6:33
|
| Criteria: |
Protein sequence homology |
| |
|
LOC_Os01g32364 |
| Gene Name: |
Os1bglu1 |
| Alternate Gene Name: |
Os01g0508000, UniGene Os.35044
|
| Gene Description: |
beta-mannosidase/glucosidase homologue
|
| MSU Annotation: |
Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed |
| GenBank Genomic Acc: |
AP003217, AP003435.2 |
| GenBank Protein Acc: |
BAD73293 |
| Comment: |
AK069177 AK060988 NM_001049691
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g59819 |
| Gene Name: |
Os1bglu2 |
| Alternate Gene Name: |
UniGene Os.61547
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os1bglu2 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AP003570 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g59840 |
| Gene Name: |
Os1bglu3 |
| Alternate Gene Name: |
Os01g0813800, UniGene Os.51558
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os1bglu3 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AP003570, AP004331, AP008207 |
| GenBank Protein Acc: |
NP_001044601.1 |
| Comment: |
AK067934 AK063065 NM_001051136.1
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g67220 |
| Gene Name: |
Os1bglu4 |
| Alternate Gene Name: |
Os01g0897600, UniGene Os.18285
|
| Gene Description: |
beta-glucosidase-like protein without signal sequence
|
| MSU Annotation: |
Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed |
| GenBank Genomic Acc: |
AP003349, AP003418, AP008207, NC008394.1 |
| GenBank Protein Acc: |
BAD82183, BAD82346 |
| Comment: |
AK243365
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g70520 |
| Gene Name: |
Os1bglu5 |
| Alternate Gene Name: |
Os01g0930800, UniGene Os.26537
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AP003272, AP004330, AP008207 |
| GenBank Protein Acc: |
BAD88178, BAD87322, NP_001045291.1 |
| Comment: |
AK070499 AK119221
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g11420 |
| Gene Name: |
Os3bglu6 |
| Alternate Gene Name: |
Os03g0212800, UniGene Os.15799
|
| Gene Description: |
beta-glucosidase/beta-fucosidase/beta-galactosidase
|
| MSU Annotation: |
Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed |
| GenBank Genomic Acc: |
AP008209, AC091670 |
| GenBank Protein Acc: |
AAN01354, NP_001049358 |
| Comment: |
AY129294 AK119546 NM_001055893
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g49600 |
| Gene Name: |
Os3bglu7 |
| Alternate Gene Name: |
Os03g0703000, UniGene Os.5072, bglu1
|
| Gene Description: |
beta-glucosidase, exo-beta-glucanse (previously BGlu1)
|
| MSU Annotation: |
Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed |
| GenBank Genomic Acc: |
AP008209, AC091670 |
| GenBank Protein Acc: |
AAA84906 |
| Comment: |
U28047 AK100165 AK103027 AK059920 AK105026
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g49610 |
| Gene Name: |
Os3bglu8 |
| Alternate Gene Name: |
Os03g0703100, UniGene Os.32141
|
| Gene Description: |
beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7
|
| MSU Annotation: |
Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed |
| GenBank Genomic Acc: |
AC091670, AC133334, AP008209 |
| GenBank Protein Acc: |
NP_001051014 |
| Comment: |
CT834080
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g39814 |
| Gene Name: |
Os4bglu9 |
| Alternate Gene Name: |
Os04g0474300, UniGene Os.10238
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase
|
| MSU Annotation: |
Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed |
| GenBank Genomic Acc: |
AP008210 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g39840 |
| Gene Name: |
Os4bglu10 |
| Alternate Gene Name: |
Os04g0474500, UniGene Os.10324
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase (pseudogene?)
|
| MSU Annotation: |
Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed |
| GenBank Genomic Acc: |
AL731582, AP008210 |
| GenBank Protein Acc: |
NP_001053067.1 |
| Comment: |
AK065793 AK062029 NM_001059602
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g39864 |
| Gene Name: |
Os4bglu11 |
| Alternate Gene Name: |
Os04g0474700, UniGene Os.88673
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase
|
| MSU Annotation: |
Os4bglu11 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed |
| GenBank Genomic Acc: |
AL731582, AP008210 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g39880 |
| Gene Name: |
Os4bglu12 |
| Alternate Gene Name: |
Os04g0474800, UniGene Os.59390
|
| Gene Description: |
beta-glucosidase, exo-beta-glucanase
|
| MSU Annotation: |
Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
| GenBank Genomic Acc: |
AL731582, AP008210 |
| Comment: |
AK062776 AK100820 AK105375
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g39900 |
| Gene Name: |
Os4bglu13 |
| Alternate Gene Name: |
Os04g0474900, UniGene Os.8442
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/b-glucosidase
|
| MSU Annotation: |
Os4bglu13 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/b-glucosidase, expressed |
| GenBank Genomic Acc: |
AL731582, AP008210 |
| GenBank Protein Acc: |
NP_001053071 |
| Comment: |
AK070962 NM_001059606.1
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g43360 |
| Gene Name: |
Os4bglu14 |
| Alternate Gene Name: |
Os04g0513100, UniGene Os.52541
|
| Gene Description: |
monolignol beta-glucoside homologue without catalytic acid/base
|
| MSU Annotation: |
Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed |
| GenBank Genomic Acc: |
AL606622, AP008210 |
| GenBank Protein Acc: |
NP_001053302 |
| Comment: |
AK067841 NM_001059837
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g43380 |
| Gene Name: |
Os4bglu15 |
| Gene Description: |
GH1 gene fragment
|
| MSU Annotation: |
Os4bglu15 - GH1 gene fragment |
| GenBank Genomic Acc: |
AL606622, AP008210 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g43390 |
| Gene Name: |
Os4bglu16 |
| Alternate Gene Name: |
Os04g0513400, UniGene Os.35154
|
| Gene Description: |
monolignol beta-glucoside homologue
|
| MSU Annotation: |
Os4bglu16 - monolignol beta-glucoside homologue, expressed |
| GenBank Genomic Acc: |
AL606622, AL606659, AP008210 |
| Comment: |
AK066850 AK068772 NM_001059838
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g43400 |
| Gene Name: |
Os4bglu17 |
| Alternate Gene Name: |
Os04g0513700, UniGene Os.68895
|
| Gene Description: |
GH1 gene fragment, possibly expressed
|
| MSU Annotation: |
Os4bglu17 - GH1 gene fragment, expressed |
| GenBank Genomic Acc: |
AL606622, AL606659, AP008210 |
| GenBank Protein Acc: |
NP_001053304 |
| Comment: |
NM_001059839
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g43410 |
| Gene Name: |
Os4bglu18 |
| Alternate Gene Name: |
Os04g0513900, UniGene Os.27019
|
| Gene Description: |
monolignol beta-glucoside homologue
|
| MSU Annotation: |
Os4bglu18 - monolignol beta-glucoside homologue, expressed |
| GenBank Genomic Acc: |
AL606622, AL606659, AP008210 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g30250 |
| Gene Name: |
Os5bglu19 |
| Alternate Gene Name: |
Os05g0365600, Unigene Os.24873
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os5bglu19 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AC121366, AC135927, AC135927, AC137618, AP008211 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g30280 |
| Gene Name: |
Os5bglu20 |
| Alternate Gene Name: |
Os05g0365700, UniGene Os.74437
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AC121366, AC137618, AP008211 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g30300 |
| Gene Name: |
Os5bglu21 |
| Alternate Gene Name: |
Os05g0366000, UniGene Os.80244
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os5bglu21 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AC121366, AC137618, AP008211 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g30350 |
| Gene Name: |
Os5bglu22 |
| Alternate Gene Name: |
Os05g0366600, UniGene Os.11830
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AC121366, AC137618, AP008211 |
| GenBank Protein Acc: |
NP_001055331.1 |
| Comment: |
AK071469 NM_001061866
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g30390 |
| Gene Name: |
Os5bglu23 |
| Alternate Gene Name: |
Os05g0366800, UniGene Os.80238 ?
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, likely pseudogene in japonica
|
| MSU Annotation: |
Os5bglu23 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, likely pseudogene in japonica |
| GenBank Genomic Acc: |
AC137618, AC104279, AP008211 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g21570 |
| Gene Name: |
Os6bglu24 |
| Alternate Gene Name: |
Os06g0320200, Unigene Os.80436
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase
|
| MSU Annotation: |
Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed |
| GenBank Genomic Acc: |
AP003543, AP008212 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g46940 |
| Gene Name: |
Os6bglu25 |
| Alternate Gene Name: |
Os06g0683300, UniGene Os.49601
|
| Gene Description: |
beta-glucosidase homologue, similar to Os3bglu6
|
| MSU Annotation: |
Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed |
| GenBank Genomic Acc: |
AP003766, AP008212 |
| Structural Annotation: |
|
|
|
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LOC_Os07g46280 |
| Gene Name: |
Os7bglu26 |
| Alternate Gene Name: |
Os07g0656200, UniGene Os.20617
|
| Gene Description: |
beta-mannosidase/glucosidase/exoglucanase
|
| MSU Annotation: |
Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed |
| GenBank Genomic Acc: |
AP005182, AP005184, AP008213 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g39860 |
| Gene Name: |
Os8bglu27 |
| Alternate Gene Name: |
Os08g0509200, UniGene Os.17880
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4bglu12 exoglucanase
|
| MSU Annotation: |
Os8bglu27 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed |
| GenBank Genomic Acc: |
AP005816. AP006049, AP008214 |
| GenBank Protein Acc: |
NP_001062201 |
| Comment: |
AK067001 AK067231 AK120430
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g39870 |
| Gene Name: |
Os8bglu28 |
| Alternate Gene Name: |
Os08g0509400, UniGene Os.7762
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4bglu12 exoglucanase
|
| MSU Annotation: |
Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed |
| GenBank Genomic Acc: |
AP006049, AP005816, AP008214 |
| GenBank Protein Acc: |
NP_001062202 |
| Comment: |
AK105908 AK059210 AK098938
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g31410 |
| Gene Name: |
Os9bglu29 |
| Alternate Gene Name: |
Os09g0490400
|
| Gene Description: |
beta-glucosidase homologue, similar to Os4bglu12 exoglucanase
|
| MSU Annotation: |
Os9bglu29 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed |
| GenBank Genomic Acc: |
AC108758, AC108762, AP008215 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g31430 |
| Gene Name: |
Os9bglu30 |
| Alternate Gene Name: |
bglu2, UniGene Os.11510, Os09g0491100, UniGene Os.81365
|
| Gene Description: |
beta-glucosidase, similar to Os4bglu12 exoglucanase
|
| MSU Annotation: |
Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed |
| GenBank Genomic Acc: |
AC108758, AC108762, AP008215 |
| GenBank Protein Acc: |
AAL14713.1 |
| Comment: |
AY056828 AK066710
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g33680 |
| Gene Name: |
Os9bglu31 |
| Alternate Gene Name: |
Os09g0511600, UniGene Os.9105
|
| Gene Description: |
beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase
|
| MSU Annotation: |
Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed |
| GenBank Genomic Acc: |
AC137594, AP008215 |
| GenBank Protein Acc: |
NP_001063638.1 |
| Comment: |
AK121679 AK102869
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g33690 |
| Gene Name: |
Os9bglu32 |
| Alternate Gene Name: |
Os09g0511700, UniGene Os.17433
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase
|
| MSU Annotation: |
Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed |
| GenBank Genomic Acc: |
AC137594, AP006752, AP008215 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g33710 |
| Gene Name: |
Os9bglu33 |
| Alternate Gene Name: |
Os09g0511900, UniGene Os.52315
|
| Gene Description: |
beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase
|
| MSU Annotation: |
Os9bglu33 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed |
| GenBank Genomic Acc: |
AC137594, AP006752, AP008215 |
| GenBank Protein Acc: |
NP_001063640.1 |
| Comment: |
AK066336
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os10g17650 |
| Gene Name: |
Os10bglu34 |
| Alternate Gene Name: |
Os10g0323500, UniGene Os.46489
|
| Gene Description: |
beta-glucosidase homologue, similar to Os3bglu6
|
| MSU Annotation: |
Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed |
| GenBank Genomic Acc: |
AC074354, AE16959, AP008216 |
| GenBank Protein Acc: |
NP_001064347.1 |
| Comment: |
AK071372
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08120 |
| Gene Name: |
Os11bglu35 |
| Alternate Gene Name: |
Os11g0184200, UniGene Os.90999
|
| Gene Description: |
GH1 pseudogene
|
| MSU Annotation: |
Os11bglu37 - GH1 pseudogene |
| GenBank Genomic Acc: |
AC134047, AP008217 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08120 |
| Gene Name: |
Os11bglu37 |
| Gene Description: |
GH1 pseudogene
|
| MSU Annotation: |
Os11bglu37 - GH1 pseudogene |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g45710 |
| Gene Name: |
Os11bglu36 |
| Alternate Gene Name: |
rice SFR2, Os11g0683500, Os11g0683600, UniGene Os.87731
|
| Gene Description: |
rice SFR2 homologue
|
| MSU Annotation: |
Os11bglu36 SFR2 homologue, expressed |
| GenBank Genomic Acc: |
AC135190, AP008217 |
| GenBank Protein Acc: |
CAD36515 |
| Comment: |
AJ491323 AK119461
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g23170 |
| Gene Name: |
Os12bglu38 |
| Alternate Gene Name: |
Os12g0420100, UniGene Os.4956
|
| Gene Description: |
beta-glucosidase/beta-mannosidase/exoglucanase homologue
|
| MSU Annotation: |
Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed |
| GenBank Genomic Acc: |
AL731785, AL732381, AP008218 |
| GenBank Protein Acc: |
NP_001066656.1 |
| Comment: |
AJ491323 AK071058
|
| Structural Annotation: |
|
|
|
| |
