Rice calmodulins
| Contact: | Teerapong Buaboocha |
| Organization: | Chulalongkorn University, Bangkok, Thailand |
| Source: | Bongkoj Boonburapong, Teerapong Buaboocha (2007) Genome-wide identification and analyses of the rice calmodulin and related potential calcium sensor proteins. BMC Plant Biology, 7:4 |
| Criteria: | The Oryza sativa L. genome was searched against the Interpro database by five different methods including HMMPfam, HMMSmart, BlastProDom, ProfileScan and superfamily to find proteins that contain calcium-binding EF-hand motifs. Calmodulin-related proteins were identified based on amino acid sequence identity with rice CaM1 and CBL3 and phylogenetic analysis based on amino acid sequence alignments by ClustalX. |
| Gene Name: | OsCam1-3 |
| Gene Description: | Calmodulin |
| MSU Annotation: | OsCam1-3 - Calmodulin, expressed |
| GenBank Genomic Acc: | AP000969 |
| Mutant Line/Info: | AG211035 |
| Comment: | AU184693 |
| Structural Annotation: | |
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| Gene Name: | OsCam3 |
| Gene Description: | Calmodulin |
| MSU Annotation: | OsCam3 - Calmodulin, expressed |
| GenBank Genomic Acc: | AP000815 |
| Comment: | AK058646 |
| Structural Annotation: | |
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| Gene Name: | OsCam1-1 |
| Gene Description: | Calmodulin |
| MSU Annotation: | OsCam1-1 - Calmodulin, expressed |
| GenBank Genomic Acc: | AC119748 |
| Comment: | AK059756 |
| Structural Annotation: | |
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| Gene Name: | OsCam2 |
| Gene Description: | Calmodulin |
| MSU Annotation: | OsCam2 - Calmodulin, expressed |
| GenBank Genomic Acc: | AC129718 |
| Comment: | AK059534 |
| Structural Annotation: | |
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| Gene Name: | OsCam1-2 |
| Gene Description: | Calmodulin |
| MSU Annotation: | OsCam1-2 - Calmodulin, expressed |
| GenBank Genomic Acc: | AP003818 |
| Mutant Line/Info: | AG024320, AG024645, AG212378, AG211036, AG211035 |
| Comment: | AF441191 |
| Structural Annotation: | |
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This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation and funds from the Georgia Research Alliance, Georgia Seed Development, and University of Georgia.