MTN26 family protein

   
Superfamily: Cysteine Rich Peptides
Contact: Kevin Silverstein
Organization: University of Minnesota
Source: Silverstein, K.A.T., Moskal, W.A., Jr., Wu, H., Underwood, B.A., Graham, M.A., Town, C.D, and VandenBosch, K.A. (2007) Small cysteine peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J. 51(2):262-80
Criteria: Iterative HMM family-based searches, starting with known cysteine-rich antimicrobial sequences.
   

LOC_Os01g48049

Gene Name: MTN26L1
Gene Description: MtN26 family protein precursor
MSU Annotation: MTN26L1 - MtN26 family protein precursor
Comment: Pseudogene. Annotated gene is missing key cysteines that appear just upstream in the same exon. Could not find the remaining exons of this likely pseudogene.
Structural Annotation:  

   

LOC_Os03g06580

Gene Name: MTN26L2
Gene Description: MtN26 family protein precursor, expressed
MSU Annotation: MTN26L2 - MtN26 family protein precursor, expressed
Structural Annotation:  

   

LOC_Os10g28380

Gene Name: MTN26L3
Gene Description: MtN26 family protein precursor, putative
MSU Annotation: MTN26L3 - MtN26 family protein precursor, putative
Structural Annotation:  

   

LOC_Os10g28400

Gene Name: MTN26L4
Gene Description: MtN26 family protein precursor
MSU Annotation: MTN26L4 - MtN26 family protein precursor, expressed
Comment: Pseudogene. High-confidence pseudogene is highly similar to an adjacent paralog plus several paralogs elsewhere. The gene would be intact except that the second canonical donor splice site is lost (it is a 'ct' instead of 'gt', though it appears in precisely the right spot relative to all paralogs).
Structural Annotation:  

   

LOC_Os11g37210

Gene Name: MTN26L5
Gene Description: MtN26 family protein precursor
MSU Annotation: MTN26L5 - MtN26 family protein precursor, expressed
Comment: This annotation extends across two TIGR loci. This correction is of high confidence due to alignment with close homologs from wheat and other species.
Structural Annotation:  

 

NSF Logo This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation.