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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os01g48370 |
| Gene Name: |
OsFBT1 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT1 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003264 |
| Structural Annotation: |
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LOC_Os01g55430 |
| Gene Name: |
OsFBT2 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT2 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003409 |
| Structural Annotation: |
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LOC_Os01g64700 |
| Gene Name: |
OsFBT3 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT3 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003270 |
| Structural Annotation: |
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LOC_Os02g47640 |
| Gene Name: |
OsFBT4 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT4 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005323 |
| Structural Annotation: |
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LOC_Os03g22800 |
| Gene Name: |
OsFBT5 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT5 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AC135257 |
| Structural Annotation: |
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LOC_Os04g59130 |
| Gene Name: |
OsFBT6 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT6 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AL606637 |
| Structural Annotation: |
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LOC_Os05g36190 |
| Gene Name: |
OsFBT7 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT7 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AC105318 |
| Structural Annotation: |
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LOC_Os05g40520 |
| Gene Name: |
OsFBT8 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT8 - F-box and tubby domain containing protein |
| GenBank Genomic Acc: |
AC118289 |
| Structural Annotation: |
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LOC_Os05g43850 |
| Gene Name: |
OsFBT9 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT9 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AC132485 |
| Structural Annotation: |
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LOC_Os05g48670 |
| Gene Name: |
OsFBT10 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT10 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AC113333 |
| Structural Annotation: |
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LOC_Os07g47110 |
| Gene Name: |
OsFBT11 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT11 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004274 |
| Structural Annotation: |
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LOC_Os08g01290 |
| Gene Name: |
OsFBT12 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT12 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004654 |
| Structural Annotation: |
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LOC_Os11g06420 |
| Gene Name: |
OsFBT13 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT13 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AC120533 |
| Structural Annotation: |
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LOC_Os12g06630 |
| Gene Name: |
OsFBT14 |
| Gene Description: |
F-box and tubby domain containing protein
|
| MSU Annotation: |
OsFBT14 - F-box and tubby domain containing protein, expressed |
| GenBank Genomic Acc: |
AL713906 |
| Structural Annotation: |
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