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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os01g47050 |
| Gene Name: |
OsFBK1 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK1 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP003291 |
| Structural Annotation: |
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LOC_Os02g02350 |
| Gene Name: |
OsFBK2 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK2 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP004090 |
| Structural Annotation: |
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LOC_Os02g10850 |
| Gene Name: |
OsFBK3 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK3 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP004045 |
| Structural Annotation: |
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LOC_Os02g11790 |
| Gene Name: |
OsFBK4 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK4 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP003974 |
| Structural Annotation: |
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LOC_Os02g15950 |
| Gene Name: |
OsFBK5 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK5 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP005803 |
| Structural Annotation: |
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LOC_Os02g21110 |
| Gene Name: |
OsFBK6 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK6 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP004798 |
| Structural Annotation: |
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LOC_Os02g30210 |
| Gene Name: |
OsFBK7 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK7 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP005285 |
| Structural Annotation: |
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LOC_Os02g35530 |
| Gene Name: |
OsFBK8 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK8 - F-box domain and kelch repeat containing protein |
| GenBank Genomic Acc: |
AP004144 |
| Structural Annotation: |
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LOC_Os02g36520 |
| Gene Name: |
OsFBK9 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK9 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP005116 |
| Structural Annotation: |
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LOC_Os02g51350 |
| Gene Name: |
OsFBK10 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK10 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP005848 |
| Structural Annotation: |
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LOC_Os03g07160 |
| Gene Name: |
OsFBK11 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK11 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC073556 |
| Structural Annotation: |
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LOC_Os03g07530 |
| Gene Name: |
OsFBK12 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK12 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC144491 |
| Structural Annotation: |
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LOC_Os03g30160 |
| Gene Name: |
OsFBK13 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK13 - F-box domain and kelch repeat containing protein |
| GenBank Genomic Acc: |
AC120538 |
| Structural Annotation: |
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LOC_Os04g31120 |
| Gene Name: |
OsFBK14 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK14 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AL607000 |
| Structural Annotation: |
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LOC_Os04g52830 |
| Gene Name: |
OsFBK15 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK15 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AL662970 |
| Structural Annotation: |
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LOC_Os06g39370 |
| Gene Name: |
OsFBK16 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK16 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP003617 |
| Structural Annotation: |
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LOC_Os06g44500 |
| Gene Name: |
OsFBK17 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK17 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP003579 |
| Structural Annotation: |
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LOC_Os07g05880 |
| Gene Name: |
OsFBK18 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK18 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP005632 |
| Structural Annotation: |
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LOC_Os07g47650 |
| Gene Name: |
OsFBK19 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK19 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AP004300 |
| Structural Annotation: |
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LOC_Os09g38300 |
| Gene Name: |
OsFBK20 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK20 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC137593 |
| Structural Annotation: |
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LOC_Os10g21930 |
| Gene Name: |
OsFBK21 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK21 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC092548 |
| Structural Annotation: |
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LOC_Os10g24900 |
| Gene Name: |
OsFBK22 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK22 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC078839 |
| Structural Annotation: |
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LOC_Os10g26990 |
| Gene Name: |
OsFBK23 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK23 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC027659 |
| Structural Annotation: |
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LOC_Os11g04330 |
| Gene Name: |
OsFBK24 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK24 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC123527 |
| Structural Annotation: |
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LOC_Os11g14140 |
| Gene Name: |
OsFBK25 |
| Gene Description: |
F-box domain and kelch repeat containing protein
|
| MSU Annotation: |
OsFBK25 - F-box domain and kelch repeat containing protein, expressed |
| GenBank Genomic Acc: |
AC135459 |
| Structural Annotation: |
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