Small auxin-up RNA gene family

   
Contact: Jitendra Khurana
Organization: University of Delhi
Website: http://genomeindia.org/DPMB/index.htm
Source: Jain, M., Tyagi, A.K., and Khurana, J.P. (2006) Genome-wide analysis, evolutionary expansion, and expression of early auxin-responsive SAUR gene family in rice (Oryza sativa) Genomics 88:360-371
Criteria: NCBI and TIGR rice database resources were searched with BLAST using Arabidopsis SAUR genes as the queries. Pfam analysis was used to confirm each protein sequence as a OsSAUR protein sequence.
   

LOC_Os01g06230

Gene Name: OsSAUR1
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR1 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP003225
Structural Annotation:  

   

LOC_Os01g56240

Gene Name: OsSAUR2
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR2 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP003371
Structural Annotation:  

   

LOC_Os01g70050

Gene Name: OsSAUR3
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR3 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP004223
Structural Annotation:  

   

LOC_Os02g05050

Gene Name: OsSAUR4
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR4 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005649
Structural Annotation:  

   

LOC_Os02g05060

Gene Name: OsSAUR5
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR5 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005649
Structural Annotation:  

   

LOC_Os02g07110

Gene Name: OsSAUR6
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR6 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005804
Structural Annotation:  

   

LOC_Os02g20320

Gene Name: OsSAUR7
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR7 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005743
Structural Annotation:  

   

LOC_Os02g24700

Gene Name: OsSAUR8
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR8 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP004134
Structural Annotation:  

   

LOC_Os02g24740

Gene Name: OsSAUR9
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR9 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP004134
Structural Annotation:  

   

LOC_Os02g30810

Gene Name: OsSAUR10
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR10 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005299
Structural Annotation:  

   

LOC_Os02g42990

Gene Name: OsSAUR11
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR11 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005291
Structural Annotation:  

   

LOC_Os02g52990

Gene Name: OsSAUR12
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR12 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP004125
Structural Annotation:  

   

LOC_Os03g18050

Gene Name: OsSAUR13
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR13 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AC137075
Structural Annotation:  

   

LOC_Os03g45800

Gene Name: OsSAUR14
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR14 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AC139174
Structural Annotation:  

   

LOC_Os03g45830

Gene Name: OsSAUR15
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR15 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AC139174
Structural Annotation:  

   

LOC_Os03g45850

Gene Name: OsSAUR16
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR16 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AC139174
Structural Annotation:  

   

LOC_Os03g45860

Gene Name: OsSAUR17
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR17 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AC139174
Structural Annotation:  

   

LOC_Os04g43740

Gene Name: OsSAUR18
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR18 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL731616
Structural Annotation:  

   

LOC_Os04g45370

Gene Name: OsSAUR19
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR19 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL606459
Structural Annotation:  

   

LOC_Os04g51890

Gene Name: OsSAUR20
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR20 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL606691
Structural Annotation:  

   

LOC_Os04g52670

Gene Name: OsSAUR21
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR21 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL606648
Structural Annotation:  

   

LOC_Os04g56680

Gene Name: OsSAUR22
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR22 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL606999
Structural Annotation:  

   

LOC_Os04g56690

Gene Name: OsSAUR23
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR23 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AL606999
Structural Annotation:  

   

LOC_Os06g04590

Gene Name: OsSAUR24
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR24 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP003526
Structural Annotation:  

   

LOC_Os06g45950

Gene Name: OsSAUR25
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR25 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005610
Structural Annotation:  

   

LOC_Os06g45970

Gene Name: OsSAUR26
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR26 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005610
Structural Annotation:  

   

LOC_Os06g48850

Gene Name: OsSAUR27
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR27 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP003726
Structural Annotation:  

   

LOC_Os06g48860

Gene Name: OsSAUR28
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR28 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP003726
Structural Annotation:  

   

LOC_Os06g50040

Gene Name: OsSAUR29
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR29 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP004678
Structural Annotation:  

   

LOC_Os07g29310

Gene Name: OsSAUR30
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR30 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP004315
Structural Annotation:  

   

LOC_Os08g02520

Gene Name: OsSAUR31
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR31 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP003925
Structural Annotation:  

   

LOC_Os08g02530

Gene Name: OsSAUR32
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR32 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP003925
Structural Annotation:  

   

LOC_Os08g35110

Gene Name: OsSAUR33
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR33 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP003871
Structural Annotation:  

   

LOC_Os08g42277

Gene Name: OsSAUR34
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR35 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005528
Structural Annotation:  

   

LOC_Os08g42277

Gene Name: OsSAUR35
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR35 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005528
Structural Annotation:  

   

LOC_Os08g43700

Gene Name: OsSAUR36
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR36 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005251
Structural Annotation:  

   

LOC_Os09g26590

Gene Name: OsSAUR37
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR37 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005833
Structural Annotation:  

   

LOC_Os09g26610

Gene Name: OsSAUR38
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR38 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005833
Structural Annotation:  

   

LOC_Os09g37330

Gene Name: OsSAUR39
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR39 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP006548
Structural Annotation:  

   

LOC_Os09g37350

Gene Name: OsSAUR40
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR40 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37369

Gene Name: OsSAUR41
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR41 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37380

Gene Name: OsSAUR42
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR42 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37390

Gene Name: OsSAUR43
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR43 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37394

Gene Name: OsSAUR44
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR44 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37400

Gene Name: OsSAUR45
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR45 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37410

Gene Name: OsSAUR46
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR46 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37420

Gene Name: OsSAUR47
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR47 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37430

Gene Name: OsSAUR48
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR48 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37440

Gene Name: OsSAUR49
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR49 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37452

Gene Name: OsSAUR50
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR50 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37460

Gene Name: OsSAUR51
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR51 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37470

Gene Name: OsSAUR52
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37480

Gene Name: OsSAUR53
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR53 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37490

Gene Name: OsSAUR54
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR54 - Auxin-responsive SAUR gene family member
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os09g37500

Gene Name: OsSAUR55
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR55 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AP005862
Structural Annotation:  

   

LOC_Os10g36703

Gene Name: OsSAUR56
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: CPuORF40 - conserved peptide uORF-containing transcript, expressed
GenBank Genomic Acc: AC087192
Structural Annotation:  

   

LOC_Os12g41600

Gene Name: OsSAUR57
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR57 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL731881
Structural Annotation:  

   

LOC_Os12g43110

Gene Name: OsSAUR58
Gene Description: Auxin-responsive SAUR gene family member
MSU Annotation: OsSAUR58 - Auxin-responsive SAUR gene family member, expressed
GenBank Genomic Acc: AL831803
Structural Annotation:  

 

NSF Logo This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation.