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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os01g05970 |
| Gene Name: |
OsFBO1 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO1 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP002522 |
| Structural Annotation: |
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LOC_Os01g69270 |
| Gene Name: |
OsFBO2 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO2 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP006843 |
| Structural Annotation: |
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LOC_Os01g72310 |
| Gene Name: |
OsFBO7 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO7 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003683 |
| Structural Annotation: |
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LOC_Os02g05700 |
| Gene Name: |
OsFBO8 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO8 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005412 |
| Structural Annotation: |
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LOC_Os02g29150 |
| Gene Name: |
OsFBO11 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO11 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005317 |
| Structural Annotation: |
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LOC_Os02g41910 |
| Gene Name: |
OsFBO12 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO12 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP006168 |
| Structural Annotation: |
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LOC_Os03g12940 |
| Gene Name: |
OsFBO13 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO13 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC135157 |
| Structural Annotation: |
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LOC_Os03g27250 |
| Gene Name: |
OsFBO14 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO14 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC092075 |
| Structural Annotation: |
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LOC_Os03g49250 |
| Gene Name: |
OsFBO16 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO16 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC097368 |
| Structural Annotation: |
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LOC_Os04g31610 |
| Gene Name: |
OsFBO3 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO3 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AL731619 |
| Structural Annotation: |
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LOC_Os04g40030 |
| Gene Name: |
OsFBO17 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO17 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AL731582 |
| Structural Annotation: |
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LOC_Os06g02400 |
| Gene Name: |
OsFBO18 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO18 - F-box and other domain containing protein |
| GenBank Genomic Acc: |
AP001389 |
| Structural Annotation: |
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LOC_Os06g47890 |
| Gene Name: |
OsFBO9 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO9 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003770 |
| Structural Annotation: |
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LOC_Os07g36360 |
| Gene Name: |
OsFBO19 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO19 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003960 |
| Structural Annotation: |
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LOC_Os08g20480 |
| Gene Name: |
OsFBO20 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO20 - F-box and other domain containing protein |
| GenBank Genomic Acc: |
AP005819 |
| Structural Annotation: |
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LOC_Os09g27660 |
| Gene Name: |
OsFBO21 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO21 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005308 |
| Structural Annotation: |
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LOC_Os09g39190 |
| Gene Name: |
OsFBO22 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO22 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AP006170 |
| Structural Annotation: |
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LOC_Os10g04850 |
| Gene Name: |
OsFBO5 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO5 - F-box and other domain containing protein |
| GenBank Genomic Acc: |
AC074283, AC099733 |
| Structural Annotation: |
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LOC_Os11g29710 |
| Gene Name: |
OsFBO4 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO4 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC148759 |
| Structural Annotation: |
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LOC_Os11g34460 |
| Gene Name: |
OsFBO10 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO10 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC134053 |
| Structural Annotation: |
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LOC_Os11g36450 |
| Gene Name: |
OsFBO15 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO15 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC108871 |
| Structural Annotation: |
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LOC_Os11g36790 |
| Gene Name: |
OsFBO6 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO6 - F-box and other domain containing protein, expressed |
| GenBank Genomic Acc: |
AC109929 |
| Structural Annotation: |
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LOC_Os12g04130 |
| Gene Name: |
OsFBO23 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO23 - F-box and other domain containing protein |
| GenBank Genomic Acc: |
BX000504 |
| Structural Annotation: |
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LOC_Os12g05609 |
| Gene Name: |
OsFBO24 |
| Gene Description: |
F-box and other domain containing protein
|
| MSU Annotation: |
OsFBO24 - F-box and other domain containing protein |
| GenBank Genomic Acc: |
AL929350 |
| Structural Annotation: |
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