Automated Annotation of the Rice Genome

All rice BAC/PAC were downloaded from HTGS division of GenBank as well as the PLANT division of GenBank. The BAC/PAC sequences were assembled into 12 pseudomolecules. Each of the pseudomolecule sequences were processed by our annotation pipeline as described below. Please note that all data is from automated processes and is NOT manually curated.

Steps involved in the automated annotation:

The pseudomolecule sequences and results of all analyses are stored in our central relational database (Postgres).

The sequences of the annotated genes, along with supporting evidence, can also be found on our web site.

Software Links

NSF Logo This work is supported by grants (DBI-0321538/DBI-0834043) from the National Science Foundation.